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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|238790320, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPSPFNAQK QQSSSSWLSF KLQQNILLPL VIFIIGLVIS GIGAGWLYNE IETDAKTDFQ  60
   61 RNVDRVSGEV ALRFSQPIYG LNGLRGAYAT NSHLNREQFN AYVASRNLPV EFPGVRGFGF 120
  121 IQRVQRSQLN EFIADTRADG APTFALHQLQ DKQHNDLYII KYVAPAEKNQ GVEGLDIGSE 180
  181 SVRREAALLA INSGKPTLSG TIHLVQSNVK TPGALLFVPV YKSGSNPTTI AERQASLLGL 240
  241 LYSPIVIADL LRDIPEFMNG RVDVELFDSL NDLSNKTMVF DADGSKYDNL IPDEELHDEA 300
  301 IAARIFHNTS VLPLPGREMT LRVSSTPVFE ALTERYVPWL VFAFGLLLSS ALALLIRQQV 360
  361 SGRNRAEMLA RNMTADLERL ALVAKNTSNA VVITDVKRNI VWVNDGFERI TGYSQDEVIG 420
  421 KSPGKLLQCS NTDQSVATEM KTALDAGESF KGEIVNRTKS GQEYWIELEI QPRYNDKNEL 480
  481 IGFMAIESDI SERKATYQRL EAALRENNAL LSTLNLHGII STADRDGIIT DVNDAFCTIS 540
  541 GYSREELIGQ TYRLVDSHTH STDFWQSMWN NIANGISWRG EICNKAKDGS LYWVDTTIAP 600
  601 FNNSDGQIER YISIQVDITA NKNQQANLII ARNQLVRAAD VAELGIWTWN ITENTFSFDD 660
  661 RMNDIYGVPE ELHNAPIPLS YWYSCLHPED IPDVKSAIKT ALENESVYRQ IFRIVVRDQI 720
  721 HFIQSTGTVE RDESGKAMLM MGINRDITQQ REAEDILKTA REAAEEANKA KSAFLANMSH 780
  781 ELRTPMNAIL GMLTLLRRTG LDRKQADYAV KSEAATRTLL RLLNDILDFS KIESGKMELE 840
  841 CIPFDIHVML RDLAVILSSN LKVKKVEVLF DIDPSLPQFV EGDSMRLQQI LTNLGGNALK 900
  901 FTELGEVVLF IKVITQDSHH VTLHFGVRDT GIGIAPENQE SIFSGFTQAE ASTTRRFGGT 960
  961 GLGLVISQRF VALMGGTLTL ESQPGQGSLF HFTLTLSLPS YTNLVINNET PDTLVSRAQA1020
 1021 LNNLRVLVVD DNPTACDLIQ RMGESLKWVV DVATSGNDAL QLMRQQHESG ITYGALFIDW1080
 1081 QMPGLDGWQT SKCVRELMPV DNGPMIVMIT AHDREMLLQR SEEDQALLDG YLVKPITASM1140
 1141 LLDSVIDALS ERKQPDVAKP VIAESLHRLS GIRLLIVEDN LNNQQIAREL LEDEGAEVSI1200
 1201 ANHGKEAIEI LEHHPSSFDL VLMDLQMPIM DGYNATKYIR KSLGLKNLPI IAMTANAMSS1260
 1261 DRDACLAAGM NDHIGKPFDL NNLIHIIRKY SGQTDVADTV SSITPVLLSA ELKNVATTAG1320
 1321 IDVDAAVNRL GGDLTLYQKM LSLLNEDLTN FPTQLETLLA EGDNLSASRL LHTIKGLAAQ1380
 1381 LGATELSLSA GQGEKLFSQG ITPTPDTINQ LLSEMRNKVS VIQAGIMTLI QMLSQGHENK1440
 1441 VEVDAVDIQP IELELDRLML LLKNSDMAAL EVMNKLIMTS SEQLNEQLST LNDAINQLDF1500
 1501 TKAIQLCQTL IANLPTRRNE NI

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