YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238721417, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLTYSSTQS ASSVSKLSSS KRRSRLLNAG VVFSFSLYSS LAAAGFEVVA LGVDGGVSDG  60
   61 NLTSYLIRDD SQPLYLALDA GSVLPGIAKA LEKGNFPEIT DDIAAPLTRQ GYIFRQRINS 120
  121 YFISHAHLDH VSGLIIGSPE DSKKTLYASV DTIDVLRNYY FNWRVWPNFT DSGSGTRLGT 180
  181 YRMQLVRPAQ PLSMGLTRLT GEMYPLSHDK SPSSMLLISS NNATFAYFGD TGPDEIEKSK 240
  241 NLDVVWRKLA EKVKQQQLKG MIIEVSYPND APDSKLYGHM TPKWLLKELK KLAAYSGEEE 300
  301 PLKGLPVVIS HIKPSFQQGQ DVRKTIAAEL AQGNDMGINF IIMEQGDSLR F

Type	Start	End	Confidence
Signal Peptide	1	42	0.99
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	351	0.99