YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77972448
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKKRLSVV MIAKNEASLL ADCLASVTWA DEIVVLDSGS EDETVALAQQ YGAKVYSNTE  60
   61 WPGYGKQRQL AQQYATGDYI LMLDADERVT PELKSAIQAV LLAPEDGAVY SCARRNLFLG 120
  121 RFMRHSGWYP DRVTRLYPHH QYRYNDDLVH ESLESGTAKI IPLAGDLLHL TCRDFFDFQR 180
  181 KQLNYAQAWA NQRHQQGKSC SYFSILSHTL GAFCKTWLLR AGFLDGKQGL LLAVVNAQYT 240
  241 FNKYAALWAL SHQYQKSENS

Type	Start	End	Confidence
Signal Peptide	1	30	0.91
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	260	0.99