YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238718359, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWVDYIAMKY LHLLTVVISI TLFVLRFFWK CRGSAMMDKR WVKITPHIND TLLFVSGIVL  60
   61 IFITGFYPFS PQGTWLTEKL FGVIIYILLG YVALGKRTRS QSRRWLAFIL ALGCLYLIAK 120
  121 LATTKLPLLM GYL

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.94
Transmembrane Helix	8	29	0.93
Cytoplasmic	30	47	0.94
Transmembrane Helix	48	69	0.90
Non-Cytoplasmic	70	74	0.90
Transmembrane Helix	75	95	0.92
Cytoplasmic	96	104	0.90
Transmembrane Helix	105	124	0.94
Non-Cytoplasmic	125	133	0.88