YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77963542
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNAVAAMV VMSIFAATNV AHAATLTQTD TSSWHVTANK VSSASLAVNP TGSLPVITFT  60
   61 TENVGTTPTS TFSTADAPFE VVLGGDASAT AFTLTANTIT GQTRLASTLN SSYLEIGVAY 120
  121 NSTPLTTASQ TTIFSNGTTS GAFAGLASTA LNNGVTAAGD KFVFSVASFS ADGTNVIANP 180
  181 NALPNTTWSG NIGVQFTATW TVPA

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	204	0.99