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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77963501
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLGLVRFS LLLASVLVLL AMVVQMAVTF VLSGSVETLD LVRSIFFGLL ITPWAVYFLS  60
   61 VVVEQLEESR QRLSRLVDKL EVMRYRDLEL NQQLTENIAQ LNQEIVEREK AEKAHLQVVD 120
  121 KLKEEMGHRE QAQIELGQQS ALLRSFLDAS PDLVYYRNED NEFSGCNRAM ELLTGKSEKQ 180
  181 LVGLTPKDVY APDIAEKVME TDEKVFRHNV SLTYEQWLVY PDGRKACFEL RKVPFYDRVG 240
  241 KRHGLMGFGR DITERKRYQD ALENASRDKT TFISTISHEL RTPLNGIVGL SRILLDTELD 300
  301 SEQLKYLKTI HVSAITLGNI FNDIIEMDKL ERRKVQLDNQ PIDFTGFMAD LENLTGLLVQ 360
  361 PKGLKFTMEP ELPLPEKVIT DGTRLRQILW NLIGNAVKFT QQGEIVVRVR REENDRLTFE 420
  421 VEDSGMGIPE DEQDKIFAMY YQVKDSNGGR PATGTGIGLA VSKRLAQSMG GDITVKSAQG 480
  481 SGSCFTLTIK APAVQQVASV PSGDDMPLPA LHVLLVEDIE LNVIVARSVL EKLGNSVEVA 540
  541 MNGHDALAMF KPDDFDLVLL DIQLPDMSGL DIARQIRAEY DSQSLPPLVA LTANVLKDKK 600
  601 EYLDAGMDDV LSKPLSVPAL TAMIKQFWDH KPSSAKKQEH KVMQTHESLL DTAMLEQYID 660
  661 LVGPQLIHQS LEMFEQMMPG YLAVLDSNMT ARDQKGITEE AHKIKGAAGS VGLRHIQQLA 720
  721 QQIQTPTLPA WWDNVQDWVD ELKLEWRNDV QVLREWVAEV EKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle