YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77963078, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAKHSKLI ILGSGPAGYT AAVYAARANL KPVLITGMEK GGQLTTTTDV ENWPGDPEGL  60
   61 TGPALMERMH EHAEKFQTEI LFDHINRVDL QNRPFRLFGD GAEYTCDALI IATGASARYL 120
  121 GMESEEAFKG KGVSACATCD GFFYRNQKVA VVGGGNTAVE EALYLANIAA EVHLIHRRDS 180
  181 FRSEKILIDR LMEKVKNGNI VLHTDRTLDE VLGDDMGVTG VRLKSTKNNE TEELAVAGVF 240
  241 IAIGHSPNTA IFGEQLALEN GYIKVQSGTQ GNATQTSIPG VFAAGDVMDH IYRQAITSAG 300
  301 TGCMAALDAE RYLDGLMNDK

Type	Start	End	Confidence
Signal Peptide	1	25	0.95
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	320	0.99