YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77962480
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNVTSLCWQ YLRAFALIYL CLFVGKFVAL LLPITIPGSI IGMLILFTLL SLQLLPSTWV  60
   61 KPGCQILIRY MALLFVPIGV GVMQYYDQLT KQFGPIVVSC FVSTLIVMLV VGYSSHYVHR 120
  121 ERKVIGSPTQ TEDDK

Type	Start	End	Confidence
Cytoplasmic	1	8	0.96
Transmembrane Helix	9	30	0.88
Non-Cytoplasmic	31	35	0.66
Transmembrane Helix	36	56	0.89
Cytoplasmic	57	65	0.82
Transmembrane Helix	66	86	0.94
Non-Cytoplasmic	87	92	0.89
Transmembrane Helix	93	114	0.93
Cytoplasmic	115	135	0.93