YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238720491, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKLKAVIPV AGLGMRMLPA TKAIPKEMLP IVDKPLIQYV VNECVAAGIK EIILITHSSK  60
   61 NAVENHFDTS YELEAMLEAR VKRQLLDEVQ SICPPGVTIM HIRQGHPEGL GHAVLCAKPL 120
  121 VGDAPFVVLL PDVLIDDAKS DLTRDNLAQL VKRFEETGHS QVLVHSVEPE ALSNYSVISC 180
  181 EKSILAPGDS SRIKAMVEKP QSPVDLQSNL SAVGRYVLSA DIWPLLEKTK PGAWGRIQLT 240
  241 DAIDDLAATQ PVEAVALTGQ SYNCGEKLGY MQAYVAYGLR HPQQGAEFKA WLKDFVA

Type	Start	End	Confidence
Signal Peptide	1	23	0.72
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	297	0.99