YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238720572, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQLLRRIAT LLGMTTPATY PYPALDISLP GERHFHMVGS IHMGTDGMFP LPHELLNKLN  60
   61 QADALIVEAD ITESSPSLGQ DTLAEPLVDR LSEEHYQQLL QRCEELDNDP LSMAFLPAWQ 120
  121 VALMLQARQA QRLGLRGEYG IDYQLLKAAA AQEKKIIELE GAQMQIDLLE TLPDNGMSLL 180
  181 LDTLTHWHTN ARLLQTMIGW WLEHHPTTDL TTLAPTFSQN LYDVLMIQRN KRWQHLLEQL 240
  241 PSGRYVVAVG ALHLYGEGNL PELLKPTISH QQ

Type	Start	End	Confidence
Signal Peptide	1	21	0.62
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	272	0.99