YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238717974, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLLLLAGC SSTQNDKPHK LIDRGEYKID TNNPSVAQND RVRFLVLHYT ATDDAESLRL  60
   61 LTQGNVSAHY LVKTHPDTVE GKPVVLQLVP EEQRAWHAGV SDWQGRNSLN DTSIGIEIVN 120
  121 KGFTETMLGR TWYPYNESQI KLIERLTKDI VERYNIAPTD VVAHSDIAPL RKSDPGPLFP 180
  181 WKRLADQGIG AWPDDATVTK YIDGREIHDT ASVAIIQQAL ARYGYKIPQS GTLDDETRQV 240
  241 ITAFQMHFRA QDFSGTPDVE TEAIALALVE KYRS

Type	Start	End	Confidence
Signal Peptide	1	15	0.80
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	274	0.99