YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77961527, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRTRHLARK TLNAGLILSF SLYSSLVAAG FEVVALGVDG GVSDGNLTSY LIRDDSQPVY  60
   61 LALDAGSVLP GITKALEKGS FPEITDEIAA PLTRQGYIFR QRINSYFISH AHLDHVSGLI 120
  121 IGSPEDSKKT IYASASTIDV LRNYYFNWRV WPNFTDSGSG TRLGTYRMQM VRPAQPLSLG 180
  181 LTRLTGEMFP LSHDKLPSSM LLITSNNAAF AYFGDTGPDE IEKSKNLDTV WRKLAEKVKQ 240
  241 QQLKGMIIEV SYPNAVSDGK LNGHMTPKWL LKELKNLEKQ SGEGQPLKGL PVVISHIKPS 300
  301 LQQGQDVRKT IAAELQQGND MGVNFILMDQ GDSQKF

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	336	0.99