YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77961518
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEINKSCVGK NVKKQRPVNL DLQTIRFPVT AIASILHRVS GVMTFVAVGI LLWLLGLSVS  60
   61 SQDGFMQAAA IMNSFIVKFI FWGILTALAY HVCGGIRHLL MDFGYIEESL AAGTRSAQVA 120
  121 MVLTLVLSVL AGVLVW

Type	Start	End	Confidence
Cytoplasmic	1	34	0.93
Transmembrane Helix	35	57	0.90
Non-Cytoplasmic	58	74	0.80
Transmembrane Helix	75	96	0.86
Cytoplasmic	97	113	0.78
Transmembrane Helix	114	135	0.89
Non-Cytoplasmic	136	136	0.93