YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77961275, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEVIIPLYL MAIMNNLIQQ LQSMLGQVTK KSNEGGSSLS NMLVPGALGG LAGLLVGSKS  60
   61 SRKLLSKYGT SALLAGGGAV LSTVLWNKYK DRIRQNHPDG SQYGQQTAPV DQRVQRLVMA 120
  121 LVFAAKSDGH IDAKERRIIE QNMQEAGIGE QGERLVQQAI DRPLDPQLLA REIQNEEEAL 180
  181 ELYFLSCAVI DVDHFMERSY LAALGDALKI PQDVRDGIEQ DIQQQKQGIA D

Type	Start	End	Confidence
Cytoplasmic	1	37	0.61
Transmembrane Helix	38	57	0.81
Non-Cytoplasmic	58	67	0.53
Transmembrane Helix	68	86	0.84
Cytoplasmic	87	231	0.62