YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238717579, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVGVFMVFS IFRRRVVLGM VAVALATGLN VKSYAAADLL NQVKERGTLI VGLEGTYPPF  60
   61 SFQGEDGKLT GFEVDFANAL AEHMGIKAKI TPTKWDGMLA SLESKRIDVA INQVTISDER 120
  121 KKKYDFSTPY TVSGIQVLTK KGNEGNFSKP EDLEGKKVGV GLGSNYEQWL RENLKGVDIR 180
  181 TYDDDPTKYQ DLRVGRTDAI LVDRLAALDL VKKTNGTLAV AGPAFARQES GVALRKDNPE 240
  241 LLAAINQAIA EMQKDGTLAK ISEKYFGADV TK

Type	Start	End	Confidence
Signal Peptide	1	35	0.94
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	272	0.99