YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77960559
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRFWRILIA LLLVPTLAQA EPATVEKIHD APAVRGSIIA AMLQDHDNPF LLYPYETNYL  60
   61 LYTYTSDINK DAISSYDWAQ NAKRDEVKFQ LSLGFPIWRG IAGENSLLGA SYTQRSWWQA 120
  121 SNSDESSPFR ETNYEPQLFL AWATDYELAG WTFREVEFGY NHQSNGKADP TSRSWDRVYT 180
  181 RVMAQRGNLE IDLKPWYRLP ENDAKDDNPD INKYMGYYRL KVGYALGDSV FSIDGHYNWN 240
  241 TGFGGAEMGW SYPITRHVRF YTQVFSGYGE SMIDYNFRQT RVGVGIMLND VL

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	292	0.99