YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238799305, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMPWLKSLL FIACLTGVIH SAQAGVLVGG TRVIYDGAKK EATLSVTNQD KSTPYLIQSW  60
   61 VDNIEATNNN KAPFIITPPL FRLDAGQESN LRILLAGGSL PQDRESAYWL NVKTIPSSKK 120
  121 SDGNQLFISI KNRIKLFYRP AGLVGQAADA YKALSFSRQG QQLKISNPTP YYVSFHTLKV 180
  181 GASEIKGPLM IAPKGTLTAD LPANASGTVS WQAITDFGGT SDSATATL

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	228	0.99