YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77959698
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNTKFARSV MAVVLGTALI SGSVLAEDTM LNKASNAVDR TGAKIDSSMK KVDNYMGDSA  60
   61 ATAKVKSALL EEKSLKSTDI SVETNHGVVT LSGFVTSQAE AETAVEIAAN VEGVKSVSDK 120
  121 LHVKDQKTQS VSEYAGDAAT TSSIKAKLLA DDIVPSRKIK VETTEGVVQL SGTVENKAQS 180
  181 ERAESIAKAV DGVKSVKNDL SIKP

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	204	0.99