YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238716296, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMRMNDNLD ESGELHEINV TPFIDVMLVL LIIFMVAAPL ATVDIKVDLP ASSAVPQPRP  60
   61 EKPVFLTVKA DNQLYVGDQQ VDRDTLAAAL DKVTQSNKET TIFFQADKVV DYETLMSVMD 120
  121 ALRKSGYLKV GLVGMEAGGA K

Type	Start	End	Confidence
Cytoplasmic	1	20	0.59
Transmembrane Helix	21	43	0.86
Non-Cytoplasmic	44	141	0.67