YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77959539, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.33
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLILRTVLA VFYCVLVCVF GSIYCLFRPR NPRNLATFAH LFGRMSVLFG ITVEQRIPKE  60
   61 AASYGTCIYI ANHQNNYDMV TMSNVVQSGT VTVGKKSLLW VPLFGPLYWL TGNLLIDRDN 120
  121 RAKAHGTIAQ VVEQVKKRDV SIWMFPEGTR SRGRGLLPFK TGAFHAAIAA GVPIVPICVS 180
  181 STNHINLNRW SNGKVIVEIM PPVDTTGYGK ERVRELSEHC RNLMLAKIEQ LDAEIAQEAQ 240
  241 QTATEK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.33
Transmembrane Helix	7	27	0.67
Non-Cytoplasmic	28	246	0.57