YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238714794, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTKLKAVIP VAGLGMRMLP ATKAIPKEML PIVDKPLIQY VVNECVAAGI KEIILITHSS  60
   61 KNAVENHFDT SYELEAMLEA RVKRQLLDEV QSICPSGVTI MHIRQGHPEG LGHAVLCAKP 120
  121 LVGDAPFAVL LPDVLIDDAK SDLTRDNLAQ LVKRFEESGT SQVLVHSVEP EALSNYSVIS 180
  181 CEKTELAPGE SSRIKAMVEK PQSPVDLQSN LSAVGRYVLS ANIWPQLEKT KPGAWGRIQL 240
  241 TDAIDALAEE EPVDAVALTG QSYNCGEKLG YMQAYVAYGL RHPQQGVEFK AWLKDFVA

Type	Start	End	Confidence
Signal Peptide	1	24	0.72
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	298	0.99