YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77958968
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMKIVVLVS GQGSNLQALI EAQQQGRISG QISAVFSNNP AAYGLERAKL AGIPHHGLDA  60
   61 KTFADRASFD AALAQAIDQY QPDLLVLAGY MRILSPVFVQ HYAGRMLNIH PSLLPKYPGL 120
  121 HTHRQALENG DQEHGTSVHF VTEELDGGPV ILQAKVPIFS DDTEDDVIER VQTQEHNIYP 180
  181 LVVNWFTDGR LTMGDDAAWL DGKRLPAQGY AAEE

Type	Start	End	Confidence
Signal Peptide	1	18	0.67
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	214	0.99