YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77958936
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSLLLLPM LIAALTGLAH ADDTAIQQTL KKLDIQQADI QPSPIPGLST VMTESGVLYI  60
   61 SADGKHLLQG PLYDVSGSQP VNVTNQSLVK RLNALSGEMI VYKAPQEKHV VTVFTDITCG 120
  121 YCHKLHEQMK EYNALGITVR YLAFPRQGLS SQAEKDMRSI WCMADRNKAF DDAMKGTEIS 180
  181 PATCKTDISK HYQLGVQFGI QGTPAIVLQN GTVVPGYMEP KEMLQMLNKH QASAKAAG

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	238	0.99