YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238782966, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNIFAKNHT SRPHSSPRKL TEADVTPENI FYQRRKVLQA LGITAATLAL PTSAQADLLA  60
   61 WFKGNNRPKA PSGKPLEFTQ SAAYHPNLAL TPEDKVTGYN NFYEFGLDKA DPAANAGTLK 120
  121 TEGWKIKIDG EVAKPMTLDM DDLMKRFPLE ERIYRMRCVE AWSMVVPWIG FELGKLLKLV 180
  181 EPTSNARYVA FQTLYAPDQM PGQEDRFIGG GLKYPYVEGL RLDEAMHPLA FMTLGVYGKA 240
  241 LPPQNGAPLR LITPWKYGFK GIKSIVHIRL TNDQPPTTWN LSAPDEYGFY ANVNPHVDHP 300
  301 RWSQATERFI GSGGILDVQR QPTLLFNGYA DQVASLYRGL DLRKNF

Type	Start	End	Confidence
Signal Peptide	1	56	0.66
N-region	1	47
H-region	48	53
C-region	54	56
Cleavage Site	56	57
Non-Cytoplasmic	57	346	0.99