YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77958465
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKKRLSVV MITKNEASLL ADCLASISWA DEIVVLDSGS EDNTVALAQQ YGAKVHSNTE  60
   61 WPGYGKQRQL AQQYASGDYI LMLDADERVT PELKAAIETV LLAPEEGAVY SCARRNLFLG 120
  121 RFMRHSGWYP DRVTRLYPHH QFRYNDDLVH ESLASGYAKV IPLAGDLLHL TCRDFFTFQR 180
  181 KQLNYAEAWA TQRYQQGKSC SYFSILSHTL GAFCKTWLFR AGFLDGQQGF LLAVVNAQYT 240
  241 FNKYAALWAL SHQHQKSENS

Type	Start	End	Confidence
Signal Peptide	1	30	0.90
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	260	0.99