YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77958170
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQPLKIVT LLGSLRSGSY NAMVARALPK LAPAGFTIEA LPSIRDIPLY DADVQQEDGF  60
   61 PTTVQAIAEQ IRQADGVIIV TPEYNYSVPG GLKNAIDWLS RLPNQPLANK PVAIQTSSMG 120
  121 PIGGARCQYH LRQILVFLDA MVMNKPEFMG GVIQSKVDEQ AKELSDQGTL DFLTKQLAAF 180
  181 ATYIDRVREK

Type	Start	End	Confidence
Signal Peptide	1	21	0.55
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	190	0.99