YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77957941
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFSIVRRRV VLGMVAVALA TGLNVKSYAA GDLLNQVKER GTLIVGLEGT YPPFSFQGED  60
   61 GKLTGFEVDF ANALAEHMGI KAKITPTKWD GMLASLESKR IDVAINQVTI SDERKKKYDF 120
  121 STPYTVSGIQ VLTKKGNEGN FTKPEDLEGK KVGVGLGSNY EQWLRENLKG VDIRTYDDDP 180
  181 TKYQDLRVGR TDAILVDRLA ALDLVKKTNN TLAVAGPAFA RQESGVALRK DNPELLAAIN 240
  241 QAIAEMQKDG TLAKISEKYF GADVTK

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	266	0.99