YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238714179, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSFSSSAF SSAATTPVPV LIAGTAIIAT HFLGVLLLVA ELGWSGTGEF VDENLQSWDS  60
   61 GLILVASILL LLLEVVCGVA VCHRQNWARW CYLLCQIVVV SYLLLVSLDW LLLDVFRVEG 120
  121 ESGTEILHSL LLQKIPDVVI IGLLFFPWHR YFNHAK

Type	Start	End	Confidence
Cytoplasmic	1	17	0.89
Transmembrane Helix	18	40	0.89
Non-Cytoplasmic	41	60	0.90
Transmembrane Helix	61	82	0.94
Cytoplasmic	83	89	0.89
Transmembrane Helix	90	113	0.89
Non-Cytoplasmic	114	129	0.94
Transmembrane Helix	130	152	0.81
Cytoplasmic	153	156	0.91