YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77957455
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLGLVRFS LLLASVLVLL AMVVQMAVTF VLSGSVETLD LVRSIFFGLL ITPWAVYFLS  60
   61 VVVEQLEESR QRLSRLVDKL EVMRYRDLEL NKQLTENIAQ LNQEIVEREK AEKAHLQVVD 120
  121 KLKEEMGHRE QAQVELGQQS ALLRSFLDAS PDLVYYRNED NEFSGCNRAM ELLTGKSEKQ 180
  181 LVGLTPKDVY APDIAEKVME TDEKVFRHNV SLTYEQWLVY PDGRKACFEL RKVPFYDRVG 240
  241 KRHGLMGFGR DITERKRYQD ALENASRDKT TFISTISHEL RTPLNGIVGL SRILLDTELD 300
  301 SEQLKYLKTI HVSAITLGNI FNDIIEMDKL ERRKVQLDNQ PIDFTGFMAD LENLTGLLVQ 360
  361 PKGLKFIMEP ELPLPEKIIT DGTRLRQILW NLIGNAVKFT QQGKIVVRVR REGNDRLTFE 420
  421 VEDSGMGIPE DEQDKIFAMY YQVKDSNGGR PATGTGIGLA VSKRLAQSMG GDITVKSTQG 480
  481 SGSCFTLTIK APAVQQAVSA PSGDEIPLPA LHILLVEDIE LNVIVARSVL EKLGNSVEVA 540
  541 MNGHDALAMF KPDDFDLVLL DIQLPDMSGL DIARQIRAQY DSESLPPLVA LTANVLKDKK 600
  601 EYLDAGMDDV LSKPLSVPAL TAMIKQFWDH KPSSSAKKQE HKVMQTHESL LDTAMLEQYI 660
  661 DLVGPQLIHQ SLEMFEQMMP GYLAVLDSNM TARDQKGITE EAHKIKGAAG SVGLRHIQQL 720
  721 AQQIQTPTLP AWWDNVQDWV DELKLEWRND VQVLREWAAE AEKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle