YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77957096, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQLAQITV LSSLIFGINA ANADAPTAEL KVVGSLTVPS CTIVAPDDGV YDFGNLSSSL  60
   61 VKSGTATTAL TPITKHWTVN CDAETYLNFT PIDNRTASAS VAGTTNFGLG NVNGTGKIGY 120
  121 YNAQMKNGTV DGKVSNVFSS ATTTFAAATT ANLTTGLRTG WSSAANTQSV GKVFTADITV 180
  181 SPILAGTTTM GGPITEDAEI DGSMTMNFAF GI

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	212	0.99