YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77957070
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREIKVGLAL GAGAAKGWAH IGVINVLKEM GVKVDVVAGC SVGSLVGAAY ASDHLNEMER  60
   61 WVRSFNYWDV IRLMDLSWRR GGLLRGERVF NAVNSIIEVQ EIAECQLPFG SVVTNLTTGR 120
  121 ELWFTEGDIK QAIRASCSMP GLFSPVWFDG YWLVDGAVVN PVPVSLARAM GADVVIAVDL 180
  181 QHDAHLVQQD LFSSQTSLEN RPSDMSENWH RRLKARIANI SLSVTNRVPS ALEIMSTSIQ 240
  241 VLENRLKRNR MAGDPPDVLI QPYCPQISML DFHRADEAIT AGKLATEKRF EQLRHLIR

Type	Start	End	Confidence
Signal Peptide	1	19	0.88
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	298	0.99