YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77957041
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTATQTVTVE TPPPAAEAAG AAIPLAAHTP VTAHTPITTT SVPTTGFATS HPGVAVQAPA  60
   61 MPAGSVLTQV GSVLGGILLL ILCGAWLVRR LGFAPQARNN KLLSVKASCQ VGQRERVVIV 120
  121 EVDNTWLVLG VTSQQVTSLH TLPRPPVDDS AGELPTKSAK PADFRQLLNH HLFNKKLKHP 180
  181 EESA

Type	Start	End	Confidence
Non-Cytoplasmic	1	65	0.48
Transmembrane Helix	66	88	0.89
Cytoplasmic	89	184	0.84