YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77956763, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENASENKIM QARDCFNFLG QITVRSLFGG YGLLANGIMF AVVSEGELYL RANDQVEGLF  60
   61 RARGMTNLVY AKRGIPILLR YYRVDAFLWE DERTLRNFAE RAYQEARTEV LSKKGPTVRL 120
  121 KDLPNLSASL ERLLWKVGIK NAAELRLEGA KRCYLKLRAV RHSLGINVLL SLAGAISGYH 180
  181 YAALPLMIRV ELVEWFETHI SAVYETA

Type	Start	End	Confidence
Cytoplasmic	1	163	0.76
Transmembrane Helix	164	183	0.82
Non-Cytoplasmic	184	207	0.91