YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77956559
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPGELRRLY LIIRVFLSYG LDELIPKIRL TLPLRIGRYL FFWLPNRHKE MPLGERLRLA  60
   61 LQELGPVWIK FGQMMSTRRD LFPPTIADQL AMLQDRVAPF DGALARKHIE IAMGGPLETW 120
  121 FDDFDQQALA SASIAQVHTA RLKHNGQEVV LKVIRPDILP IIKADVRLMY RLAGWVPKLL 180
  181 PDGRRLRPRE VVREYEKTLL DELNLLREAA NAIQLRRNFE NSPMLYIPEV YSDYCRESVL 240
  241 VMERIYGIPV SDIAALEAQG TNMKLLAERG VQVFFTQVFR DSFFHADMHP GNIFVSYEHP 300
  301 HDPLYIGIDC GIVGSLNKAD KRYLAENFIA FFNRDYRRVA ELHVDSGWVP RDTNVEDFEF 360
  361 AIRTVCEPIF EKPLAEISFG HVLLNLFNTA RRFNMEVQPQ LVLLQKTLLY VEGLGRQLYP 420
  421 QLDLWTTAKP FLESWLRDQV GLPAVIRALK EKAPFWAEKF PELPELVYDS LQQHKLLQQS 480
  481 VDKLTIQIQG QQQRQGQSRY LFGVGATLLV SGTILFLASE MEISIGFITV GILAWFIGWR 540
  541 RTR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle