YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77956266
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNTGLVLS LSLYSSLAAA GFEVVALGVD GGVTDGNLTS YLIRDDSQPL YLALDAGSVL  60
   61 PGIAKALEKG SFPDITDEMA APLTRQGYLF RQRINSYFIS HAHLDHVSGL IIGSPEDSKK 120
  121 TIYASADTID VLRNYYFNWR VWPNFTDSGS GTRLGTYRMQ MVRPAQPVSL GLTRLTGEMY 180
  181 PLSHDKSPSS MLLISSNNAA FAYFGDTGPD EIEKSKNLDT VWRKLAEKVK QQQLKGMIIE 240
  241 VSYPNAVSDG KLYGHMTPKW LLKELKNLEK QSGEGQPLKG LPVVISHIKP SLQQGQDVRQ 300
  301 SIASELQQGN DMGVNFILMA QGDRQQF

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	327	0.99