YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77866289, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSIASYRV VIRPPEPIGY RYRTDSPVPT YQPSATVLRS RGTKRECESA VNSKRPVNLD  60
   61 LGKFHFPLPA ITSILHRISG IIIFVGVAFL MYGLDLSLSG EDGFNRVNEL LDSFLAKLII 120
  121 WGILSALLYH LVAGIKHLLM DAGIGEELES GRLAAKATIA VSVVLIVLAG VWVWA

Type	Start	End	Confidence
Cytoplasmic	1	72	0.97
Transmembrane Helix	73	94	0.91
Non-Cytoplasmic	95	113	0.90
Transmembrane Helix	114	133	0.92
Cytoplasmic	134	152	0.84
Transmembrane Helix	153	174	0.93
Non-Cytoplasmic	175	175	0.97