YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77867024, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAVNRALML LMPLFAFAVA GAIYTPTASQ NTLPGEGEGE VTLSSLPPLP NWANEGLPDF  60
   61 STYQDTTEKK VAFFSYLYPR IVLANSRILL EREYLTTLEG KDALTKDELA WLTSQGDRLR 120
  121 IEAEAGTDQQ FDLLRKRLDV IPPSLILAQA ANESAWGTSR FATEGNNLFG QWCFSRGCGL 180
  181 VPLSRIEGAN HEVAKFPSPY YSVRSYIQNL NRHPTYQTVR DIRLADRNAQ KPLSGWELAE 240
  241 GLLGYSERGE EYIKEIRAMI RYNNLEFYDE EFRTLLGDRT PAQFERLASA IPDTTLLPGG 300
  301 SGGQLSPFEG

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	310	0.99