YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120554938, gi...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPLVGLIMG SKSDWPTMEH AADMLDKLGV PYETRVVSAH RTPDLLFDYA KTAADRGLKV  60
   61 IIGGAGGAAH LPGMVASQTS LPVLGVPVQS KALNGLDSLL SIVQMPGGIA VGTLAIGKAG 120
  121 ATNAGLLAAQ IVGTFDDKVR QAVEDFRKNQ TQTILDNPDP RDQ

Type	Start	End	Confidence
Cytoplasmic	1	59	0.59
Transmembrane Helix	60	76	0.52
Non-Cytoplasmic	77	163	0.59