YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77953265, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELVYALVIG ALTASGVYLL LRARTFPVVV GLTLLSYGVN LFLFSTGRLA TGKQPIIGTA  60
   61 ESYADPLPQA LVLTAIVIGF AMTAFVVVMS LRNLADNEDD HVDGKQPYKS PAPEQEDEEV 120
  121 TGK

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.42
Transmembrane Helix	4	21	0.53
Cytoplasmic	22	27	0.51
Transmembrane Helix	28	50	0.80
Non-Cytoplasmic	51	66	0.82
Transmembrane Helix	67	89	0.87
Cytoplasmic	90	123	0.83