YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68239739, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWRFHAEKK CVMKGFKTVL VMVMCSMFSF IIISCATAGD DNDSSMKQAN NGLKESEMGY  60
   61 RVLTSEEERV IVGKGTEMPF SGKYVDFHEE GTYVCRRCDA PLFRSSDKFE SGTGWPSFDD 120
  121 EIPGAVTRKT DADGRRTEIL CANCGAHLGH VFLNEGLTGK NVRHCVNSIS LDFKGADDRA 180
  181 IKPAQVSEKA IFAGGCFWGM EYHFGKVNGV LGTTVGYTGG SKEDPTYREV CSGKTGHAEA 240
  241 MEVEFDPAVV TYEELARLFF EIHDPTQVNR QGPDIGTQYR SAVYYVDDTQ KAIAEKLIGQ 300
  301 LKENGYAVVT ELEKANAFYP AEEYHQDYYE KTGHQPYCHI YQKRFK

Type	Start	End	Confidence
Signal Peptide	1	38	0.50
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	346	0.99