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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124548508, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLKRIVIA LFSLALLGVG AIVAAYFYVL PDLPDVSTLK NVQLQTPLRI YSSDGKLISQ  60
   61 FGEKRRIPLK LEEVPKPLLQ AFLATEDARF YEHGGIDPVG VIRAAVVMLT TGEKKQGAST 120
  121 ITMQVARNFF LTRDKTIIRK VKEIFISYHI EQLLTKDEIL ELYVNRIYLG QRAYGVGAAA 180
  181 QVYFGKNVQD LSLSEMSMIA GLPKAPSTLN PITSHSRALA RRNVVLMRMN EVGYINQTEY 240
  241 QLALQEPLVA KYHGAEIDLY APYISEMARD YMVQKYGEEE AYTNGYNVYT TISSDLQLLA 300
  301 QQALRNNVYA YDERHGYRGA AAVLWTGTRP DNTQIQAELA KITPVQELHP AAVLGLNGQQ 360
  361 ASVLTAKGET KVINWDGLKW ARKFITDKRQ GSVPKTAADV LNVGERIWIR DNGQYLQLSQ 420
  421 VPEVASATVS LDPQNGAIRT LVGGYSFSQS QYNRVTQAKR QLGSNIKPFI YAAALEKGFT 480
  481 LATLINNAPI NKPDISQGTA WRPKNSPDIY GGPTRLRVGL AQSINVMSVR AMRHIGLDAA 540
  541 IAELVKFGFN PNDLPRNESL ALGSPSVTPL QVSTAFNVFA NGGYLVEPFY IDRVEDSFGN 600
  601 VIEKANPTLA CKPSNTAAPQ SNDPMNFGNA DLATDEPIAY CFGQTGRYAP QIISEQVAFL 660
  661 ITEALKSVIW GGGDWSKGTG WQGTAWRAAQ LIKRHDIAGK TGTTNESRDT WFSGFSPALT 720
  721 STFWVGFDDH GRQLGRTAWN ANGEKDQITG AEAGAKTAGP GWNEFMNGVL KGTPEATLIP 780
  781 PEGIVSVRID LATGKLTRKT DYTSAFEYFI SGTEPKEYIS ETQDENSLFI ESPTDDLFQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle