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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145565653, gi...
Protein type: Transmembrane
Type Confidence: 0.58
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPKKRITMH DHAAEASLFK RRALFTFCCV VALLSVLVTN LYHLQVESYK DYETRSNDNR  60
   61 IRVVPIAPSR GLIYDRNGIL LAENQPFYSL DLIPEKISKM QETLDELGKL IEISEEEREN 120
  121 FTEALKFHRR FKPLTLKNQL TEEQVAIFSV NQHRFPGISV EAGLKRNYPY NSQLTHVLGY 180
  181 VGKINTRDRA QLERSDLWKN YAATKDIGKQ GIEKFYESLL HGIPGHLEEE VNNRGRTIRT 240
  241 LKIVPPEPGQ DIYLTIDLKL QQKAVELLQG HKGSIVAIDP RDGGILALVS SPSYDPNQFV 300
  301 QGINSKDYND LLNDKSRPLI NRATQGQYAP ASTIKPMVAL LGLDEKVVTE HTRIWDPGFW 360
  361 QIPGVERKYR DWKRWGHGWV NVYSAIIESC DTYFYELAYK VGVDAIARFM EPFGFGQNTG 420
  421 IDIFEESAGN MPSKDWKRLK YNQAWYIGDT ISVGIGQGYW TATPLQLANA TAILANKGRR 480
  481 FQPHLLKSIK DNTAKIDTPV NELPPIELKN ARNWNIINEA MRQTAHKSRF TDANYSAAMK 540
  541 TGTAQVIGVA ENTKYDADKI AEHFRDNALV IAYAPFEDPK IVLAVVMENA GWGGANAGPV 600
  601 ARAMLDEYML RDTWKPTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle