YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|120597542, gi...
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWIRGRIIER IDWNDKLFSL RIAAALTPFI PGQFIKLSQV QDEKRVARAY SLVNSPDKPY  60
   61 AEVLAVAVEE GQLSPQLQHL TIGDEIDISS TATGFMTLDE IPKGEGQGKH LWFLATGTAV 120
  121 GPFLSMLDTA EPWQRFEKIV LVYGVREAKD LAYLDKLRSY EQQYPNQFIL CLCVTREAVD 180
  181 GALQCRIPEG LASGEIEHQV GLTLSMKDSQ VMICGNPGMI SGAQSVLLDK GLTKNLRRAP 240
  241 GQITVEKYW

Type	Start	End	Confidence
Cytoplasmic	1	16	0.72
Transmembrane Helix	17	35	0.67
Non-Cytoplasmic	36	249	0.94