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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77816040, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPFVNPLA IPVLGFCAYS GTGKTTLLKQ LIPELNARGL RLAVIKHAHH NFDVDIPGKD  60
   61 SYEMRKAGAR QMLVASHVRW ALMTEDARDG DPELVHLLKQ IEADKVDIVL VEGFKKLALP 120
  121 KIELHRAAHG KPFIYTHDEN ILAIACCDDT QLPSELQRLD INNVNQIADF VVEYTQNWQA 180
  181 PNVKLPISPV DSCAIGNSKN LTVSQGLAQI LSHVSPVQDI EEVGLDALDN RVLAIDSISP 240
  241 VNVPQQTNSA MDGYAFAYQA PMPTTLTLVG EVLAGHQYSN TLNVGEAVRI MTGATVPAGA 300
  301 NTVQPRELAK EVDGIVSLEG SIDLGQHVRL AGEDIAKGQI ALPKATRLGA AEQGLLASLG 360
  361 LNCISVYRRP VVAVFSTGDE VSQPGETLKA NCIYDSNRFT IKAMAKRLGC DVLDLGIIED 420
  421 SEAALEATLA KAAKQADVVI SSGGVSVGDA DYIKTVLARL GNIDFWRINM RPGRPLAFGK 480
  481 VGSSLFFGLP GNPVAVMVSF LQFVQPALRK LGGEINWQAP LFPAISDETL RSREGRTEFI 540
  541 RGIYQLGNDG RLYVRSTGNQ GSGMLNSMVK GNCLILIGDE VETVSAGETV FIQPFADLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle