YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	URK_SHEAM
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSQQCVIIG IAGASASGKS LIAKTIYEEL CRDLGTDQIG VIAEDAYYRD QSHLSMEERV  60
   61 KTNYDHPKAM DHELLAQHLR SLKEGDSVEI PVYSYTEHTR MSDTRTMTPK KVIILEGILL 120
  121 LTDPHLRDLM DASVFMDTPL DICFLRRLTR DVAERGRTME SVISQYQKTV RPMFLQFIEP 180
  181 SKQYADIIVP RGGKNRIATD ILKARIQHLL AK

Type	Start	End	Confidence
Signal Peptide	1	18	0.80
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	212	0.99