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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|146294387, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSEPDLQL KSPIQKNYNR AVFYTYIGVI VMSLLTAWVF FDRQKTQQME QREEQVERHV  60
   61 LQIDLLLESS IRAVKSLRDV AVDHLRLGEL VRKDRLPEYG KFNESGQYFT LEPSYAKGGK 120
  121 PFTNMGRITG AGSLDGRSDK FYQELEMLFE LSLSFPVAKE AAPKASAIYY LSRQRIMSYF 180
  181 PWTNDDLRFR DELLNKKQFQ YATPAMNPQR SVFWSEAYID STGKGLLTTL GVPIYLDDEF 240
  241 IGSINLDMTL ASLARQIRVY FRMPGTVILL DQQNNILSHS DFDSSDINRV YHISQRIPSE 300
  301 LHSLPESELF DAHEGMIRNG YYIHSVALHN APWRLLYLQD EDDLFQDSWE KLQLTFILVV 360
  361 IALSVLVTIV HWQTRRSFVS PASRLLSHLE GCSQEPRKPP EKITQGWEPW FLLVSRIFEE 420
  421 NKQYTHHLAE QNKRLDKLVA RRTERLKDTT ERREREYALL RSLLDSIPEA IVFKDKEGNY 480
  481 LGCNKAAERM LGYTESEMIG LSSEDLTSPE MGIRIRAEDQ QVLKDRTPLR YQEKVELAGK 540
  541 PVLLDTLKLP FYNRRGELLG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDGLWDWY 600
  601 LDSEQIICNP AYYSMLGYKT NEFPALVSAI DHLTHPDDRI RVEEYRNQYL QDPVDAYEIE 660
  661 FRLLGKNGTY HWVLCRGRVV EFTADGQPKR MLGTHKDITR QKSNEVALLE AKQDAELANL 720
  721 YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTPQQKDYL EKAGFSAQSL LRIINDILDF 780
  781 SKIEAGKLEL ERVPFPLDKV LDHALDLNAL KAQEQGVELL LYAPVTAGLI LKGDPLRLGQ 840
  841 VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWVRD TGIGISKDQQ EKLFDAFAQA 900
  901 DGSTTRKYGG TGLGLSISKH LVSMMGGKMQ VQSELGVGST FSFTISFEIA EEAKVEPLVV 960
  961 PEKLNNLRTL VVDDNPTALQ IYSAVMRDFH FEVDTAASGA EALYKLSRDP IDLLLLDWMM1020
 1021 PEMDGSDVIS AIDTMVAEGR LDKRPVIIMM TAYSAEPLQY EVESANVFAV LQKPFKASSL1080
 1081 FDEIIAAFAD EPRLNVVQSM EETDVGEHTG LVLLVEDNFI NQQVATELLK SAGYEVVLAD1140
 1141 NGQVALDIID SRPFDAVLMD IQMPVMDGLT AARALRERYS PEELPIIAMT AHAMSGDREK1200
 1201 SLAAGMNAHI TKPIVLNELF ETLNHWIQHK NQHS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle