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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124508784, gi...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKAFYGLSD NPFSIAPNPH YLFLSDRHRE ALAHLTYGLG ETGGFVLLTG EVGTGKTTVS  60
   61 RCLLGQLPDN TDTAFILNPS LTELELLATL CDELKIRYGE NPTLKQLTDH LSHFLLANHE 120
  121 KGRNTVLIID EAQHLRPEVL EQLRLLTNLE TDTKKLLQVI LIGQPELQLL LKRQELRQLA 180
  181 QRITARYHLL PLNEDEIALY VLHRLQVAGR FEPLFTRKAI KVLQKYSGGI PRLINLLCER 240
  241 ALMAGYAQSR VPIDHRMVRQ AAAEVLGEEE KQQNPYLWPT AIVVTLAIAF GVSYWLFTLN 300
  301 QSTMSVQAST AESQPSQNVS IAAQDIKDVN SETQLTQALI KQPSTQATIV KPDPSQRVLN 360
  361 EAINQSRQID TAFAGLFSVW GKVPFKGLTA CQSAIEQGLS CYQQQGNWMS LTRLNYPAVV 420
  421 YLVDDNQQDF YGAVLAVDGE QLLMQLGEQQ LWVDRAWFNQ HFSGTFEILW QAPSLPMMEI 480
  481 SQKSSVGQLQ WLENALAHVS NRNARRVTHF DLKLENDLKA FQSQHGLKAD GIAGNQTLVR 540
  541 LNLYLSEQGP RLTDNGAHG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle