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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77815805, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNTKTLLAL AISSVCGLAH GADNLIISEY VEGSGNNKAI ELYNPTTDVI DLSQYQLRFY  60
   61 FNGSTNVGTT IALTGSLAAG ATYVVADNDA SADILAVTNQ QSTASFFNGD DAIVLTYQNQ 120
  121 VIDSLGQVGV DPGAEWGSGL LSTQDNTLRR NPNLLIADTI IDDEVNFSTW LGFAKDDISD 180
  181 LGKFSAGTPT DPVDPPPSSL VCGEDATAIH TLQGAGAVSP LNGQTLVVEA VVVSNQEAGL 240
  241 KGIFMQMADH EVDNDPLTSE GVFVYTGNAP TAYVAGDRIR LKAKVTEYQG LTELTTVSEH 300
  301 KLCATGQALP TAAVVTLPVN SSDDFEPFEG MRVRFSQDLV VNEVYNLGRY GEISLGSQRH 360
  361 FIGTQVAAPG ADALAVSAAN QRDSILLDDG LTVQNPDPVQ FPAPGLSASN TVRVGDSVTS 420
  421 LTGVMHYGFN LYRIMPTETV NFVAENPRPV APTLVDGGNL KVASFNVLNY FNGDGQGAGF 480
  481 PTARGANTLS EFERQKAKIV SAMVGISADV FGLMEIENDG FGANSAIADL VAGLNAAVGE 540
  541 ARYAYIAPTG INAIGTDAIT VGLIYRRDKV TPKGAARILS SANSPLDDNQ QPLFNDTRNR 600
  601 PMLTQAFNVN GSEEGVVVAV NHLKSKGSEC AGDPDLNDGQ GNCNSTRTRA ATAVGQWLGE 660
  661 QYPEQGVLLI GDLNAYAKED PLTALANAGF SELFAELRKP NPYTYVFSAE SGQLDHALAN 720
  721 AELLDKVVDV TQWHINTDEP RVLDYNEEFK TPAQIQDLYS TDAYRSSDHD PVVISLLLEA 780
  781 EKVAPVASFT QVVNGATVQL TSTSSDSDGH IVSAEWNLGD NTVAVGNVVT HSYRQSGEYQ 840
  841 VTLTVTDNDG LTQSISQKVT VVVENVKKPP VAQIQRINLW LVDMFISTSY DTDGVIKQHK 900
  901 WTFDNGTRAN GQVVLRLARR GQHTVELTVK DNDKLTDTTT LTYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle