YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119768674, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPAHDNDNR LKRMLSNTHL GRMLIACLAC IATQTQAEQT MTITVTKGFG ITQYASELED  60
   61 AKQLAVGDNG TLFVGSGKGG TITALVDSNN DGRVDRRYVV GKGLDNPEAI AFHKGHLYVA 120
  121 LDEKILRYEE IEQRLRRPGR PKEIYSKLPG DTKKSARYMA FGPDGRLYIA IGSPCNVCES 180
  181 ESPFGSVIAI DVDTGASEQI ATGVRTVRGM DWDPQDGKLW FADIGRDWMG DNLPPDEINR 240
  241 IDIKGMHYGF PYVHASDVIE PAYEKPENLK VVSPVYELPA HVSPMGMLFY RGEQFPAEYH 300
  301 NQLLVAENGS WNRSSKIGYQ IVVLTLDKGE VKRRETLISF LDGEFPVARP YGMALGADGS 360
  361 LFISDDLKGN VYRFFYRHEA EEEAPTQEEQ P

Type	Start	End	Confidence
Signal Peptide	1	37	0.92
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	391	0.99