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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77809883, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFKLNLITL ALLANTGFAV AADGYGIANA NTEKVKLSAW SCKGCIVETG VSGTVGVGIG  60
   61 YNSEDDIRSA NAFGTSNEVA GKFDADLAYS GEKGYRANID AYQLGMDGGR LDINAGKLGQ 120
  121 YNVNVNYRQI ATYDTNNALT PYSGIGGNNL TLPDNWIVTV TGQMPLLMGS LHPLKLSLKR 180
  181 ERMGLGFAYQ GESLWSTNVN YMREEKTGLK TASGSFLDRS MMLAEPVDYT TDTIEAGIKL 240
  241 KGDRWFTALN YNGSTFKNEY NQLSFDSAFN PNYVTAQNNT GTMALDPDNQ SHTVSLMGQY 300
  301 NDNTNVISGR FLAGQMSQDQ ALVTDNYIYA NQLATNAVDA KVDLLGINLK LVSKVTNSLR 360
  361 LSGSYDYHDR DNNTLIEGWT QIRLNKFTGE IEPIVMYNTP YDNRSQRFKV AADYRITQGM 420
  421 KLDGGYDFKR DERNYQYRET TDENTVWARF RINSFEMWDM WVKGSYGQRD GSQYQASEWI 480
  481 SSETNSLLRK YNLADRDRTQ VEARITHTPI DSLTIDVGAR YALDDYTDTV IGLTESKDTS 540
  541 YDANISYMIT TDLLATAFYN YQIIKSDQAQ VDIKESSTPN WFSYIEDKVD VVGAGISYNN 600
  601 LLENKLRMGL DYTYSNSDSN TQVRQGITGD YGDYFAKVHN INLYAQYQAT EKMAWRLDYK 660
  661 VENYKDNDAA NDIAVDGIGN VVGFGSNSHD YTAQMIMLSM SYKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle